软件版本:4.11.20210226
问题描述:请问影像图片是dicom格式,input image volume无法勾选
数据载入出错导致,请发一下日志。
日志信息
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - Session start time .......: 2024-11-17 19:10:52
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - Slicer version ...........: 4.11.20210226 (revision 29738 / 7a593c8) win-amd64 - installed release
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - Operating system .........: Windows / Personal / (Build 19045, Code Page 65001) - 64-bit
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - Memory ...................: 8035 MB physical, 12131 MB virtual
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - CPU ......................: GenuineIntel , 12 cores, 12 logical processors
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - VTK configuration ........: OpenGL2 rendering, TBB threading
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - Qt configuration .........: version 5.15.1, with SSL, requested OpenGL 3.2 (compatibility profile)
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - Developer mode enabled ...: no
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - Prefer executable CLI ....: yes
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - Application path .........: C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin
[DEBUG][Qt] 17.11.2024 19:10:52 [] (unknown:0) - Additional module paths ..: NA-MIC/Extensions-29738/DCMQI/lib/Slicer-4.11/cli-modules, NA-MIC/Extensions-29738/PETDICOMExtension/lib/Slicer-4.11/cli-modules, NA-MIC/Extensions-29738/PETDICOMExtension/lib/Slicer-4.11/qt-scripted-modules, NA-MIC/Extensions-29738/QuantitativeReporting/lib/Slicer-4.11/qt-scripted-modules, NA-MIC/Extensions-29738/SlicerDevelopmentToolbox/lib/Slicer-4.11/qt-scripted-modules, NA-MIC/Extensions-29738/SlicerRT/lib/Slicer-4.11/cli-modules, NA-MIC/Extensions-29738/SlicerRT/lib/Slicer-4.11/qt-loadable-modules, NA-MIC/Extensions-29738/SlicerRT/lib/Slicer-4.11/qt-scripted-modules, NA-MIC/Extensions-29738/SlicerRadiomics/lib/Slicer-4.11/cli-modules, NA-MIC/Extensions-29738/SlicerRadiomics/lib/Slicer-4.11/qt-scripted-modules
[DEBUG][Python] 17.11.2024 19:10:53 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\lib\Python\Lib\site-packages\pydicom\datadict.py:432) - Reversing DICOM dictionary so can look up tag from a keyword...
[DEBUG][Python] 17.11.2024 19:10:55 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\lib\Slicer-4.11\qt-scripted-modules\SubjectHierarchyPlugins\AbstractScriptedSubjectHierarchyPlugin.py:36) - Scripted subject hierarchy plugin registered: Annotations
[DEBUG][Python] 17.11.2024 19:10:57 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\lib\Slicer-4.11\qt-scripted-modules\SubjectHierarchyPlugins\AbstractScriptedSubjectHierarchyPlugin.py:36) - Scripted subject hierarchy plugin registered: SegmentEditor
[DEBUG][Python] 17.11.2024 19:10:57 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\lib\Slicer-4.11\qt-scripted-modules\SubjectHierarchyPlugins\AbstractScriptedSubjectHierarchyPlugin.py:36) - Scripted subject hierarchy plugin registered: SegmentStatistics
[DEBUG][Qt] 17.11.2024 19:10:57 [] (unknown:0) - Switch to module: "Welcome"
[INFO][Python] 17.11.2024 19:11:27 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\bin\Python\slicer\util.py:2813) - Collecting pywavelets
[DEBUG][Qt] 17.11.2024 19:11:24 [] (unknown:0) - Switch to module: "SlicerRadiomics"
[INFO][Stream] 17.11.2024 19:11:27 [] (unknown:0) - Collecting pywavelets
[INFO][Python] 17.11.2024 19:11:27 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\bin\Python\slicer\util.py:2813) - Using cached PyWavelets-1.1.1-cp36-cp36m-win_amd64.whl (4.2 MB)
[INFO][Stream] 17.11.2024 19:11:27 [] (unknown:0) - Using cached PyWavelets-1.1.1-cp36-cp36m-win_amd64.whl (4.2 MB)
[INFO][Python] 17.11.2024 19:11:27 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\bin\Python\slicer\util.py:2813) - Requirement already satisfied: numpy>=1.13.3 in c:\users\86136\appdata\local\na-mic\slicer 4.11.20210226\lib\python\lib\site-packages (from pywavelets) (1.19.2)
[INFO][Stream] 17.11.2024 19:11:27 [] (unknown:0) - Requirement already satisfied: numpy>=1.13.3 in c:\users\86136\appdata\local\na-mic\slicer 4.11.20210226\lib\python\lib\site-packages (from pywavelets) (1.19.2)
[INFO][Python] 17.11.2024 19:11:27 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\bin\Python\slicer\util.py:2813) - Installing collected packages: pywavelets
[INFO][Stream] 17.11.2024 19:11:27 [] (unknown:0) - Installing collected packages: pywavelets
[INFO][Python] 17.11.2024 19:11:27 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\bin\Python\slicer\util.py:2813) - Successfully installed pywavelets-1.1.1
[INFO][Stream] 17.11.2024 19:11:27 [] (unknown:0) - Successfully installed pywavelets-1.1.1
[INFO][Python] 17.11.2024 19:11:28 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\bin\Python\slicer\util.py:2813) - WARNING: You are using pip version 20.3.3; however, version 21.3.1 is available.
[INFO][Stream] 17.11.2024 19:11:28 [] (unknown:0) - WARNING: You are using pip version 20.3.3; however, version 21.3.1 is available.
[INFO][Python] 17.11.2024 19:11:28 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\bin\Python\slicer\util.py:2813) - You should consider upgrading via the 'C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\bin\python-real.exe -m pip install --upgrade pip' command.
[INFO][Stream] 17.11.2024 19:11:28 [] (unknown:0) - You should consider upgrading via the 'C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\bin\python-real.exe -m pip install --upgrade pip' command.
[DEBUG][Qt] 17.11.2024 19:11:35 [] (unknown:0) - Switch to module: "DICOM"
[DEBUG][Python] 17.11.2024 19:11:40 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:52) - DICOMParametricMapPluginClass : Caching files
[DEBUG][Python] 17.11.2024 19:11:40 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:49) - DICOMParametricMapPluginClass : Using cached files
[WARNING][Python] 17.11.2024 19:11:40 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\lib\Slicer-4.11\qt-scripted-modules\DICOMLib\DICOMUtils.py:629) - Geometric issues were found with 1 of the series. Please use caution.
[CRITICAL][Stream] 17.11.2024 19:11:40 [] (unknown:0) - Geometric issues were found with 1 of the series. Please use caution.
[CRITICAL][Stream] 17.11.2024 19:11:40 [] (unknown:0) -
[DEBUG][Python] 17.11.2024 19:11:40 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:52) - DICOMSegmentationPluginClass : Caching files
[DEBUG][Python] 17.11.2024 19:11:41 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:49) - DICOMSegmentationPluginClass : Using cached files
[DEBUG][Python] 17.11.2024 19:11:41 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:52) - DICOMTID1500PluginClass : Caching files
[DEBUG][Python] 17.11.2024 19:11:41 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:49) - DICOMTID1500PluginClass : Using cached files
[INFO][Python] 17.11.2024 19:11:42 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/../lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:384) - Loading with imageIOName: GDCM
[INFO][Python] 17.11.2024 19:11:43 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/../lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:458) - Window/level found in DICOM tags (center=367.98, width=640.16) has been applied to volume 1701: T1W_HR_mDIXON+C
[DEBUG][Python] 17.11.2024 19:11:43 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/../lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:799) - Irregular volume geometry detected, but maximum error is within tolerance (maximum error of 7.49401e-06 mm, tolerance threshold is 0.001 mm).
[INFO][Stream] 17.11.2024 19:11:42 [] (unknown:0) - Loading with imageIOName: GDCM
[INFO][Stream] 17.11.2024 19:11:43 [] (unknown:0) - Window/level found in DICOM tags (center=367.98, width=640.16) has been applied to volume 1701: T1W_HR_mDIXON+C
[INFO][Python] 17.11.2024 19:11:43 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/../lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:384) - Loading with imageIOName: GDCM
[INFO][Python] 17.11.2024 19:11:43 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/../lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:458) - Window/level found in DICOM tags (center=499.64, width=868.46) has been applied to volume 1701: T1W_HR_mDIXON+C_1
[DEBUG][Python] 17.11.2024 19:11:43 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/../lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:799) - Irregular volume geometry detected, but maximum error is within tolerance (maximum error of 7.49401e-06 mm, tolerance threshold is 0.001 mm).
[INFO][Stream] 17.11.2024 19:11:43 [] (unknown:0) - Loading with imageIOName: GDCM
[INFO][Stream] 17.11.2024 19:11:43 [] (unknown:0) - Window/level found in DICOM tags (center=499.64, width=868.46) has been applied to volume 1701: T1W_HR_mDIXON+C_1
[DEBUG][Qt] 17.11.2024 19:11:55 [] (unknown:0) - Switch to module: "SegmentEditor"
[DEBUG][Qt] 17.11.2024 19:13:04 [] (unknown:0) - Switch to module: "SlicerRadiomics"
[DEBUG][Qt] 17.11.2024 19:15:33 [] (unknown:0) - Switch to module: "SegmentEditor"
[DEBUG][Qt] 17.11.2024 19:16:15 [] (unknown:0) - Switch to module: "SlicerRadiomics"
[DEBUG][Qt] 17.11.2024 19:26:24 [] (unknown:0) - Switch to module: "SegmentEditor"
[DEBUG][Qt] 17.11.2024 19:26:26 [] (unknown:0) - Switch to module: "DICOM"
[DEBUG][Qt] 17.11.2024 19:26:28 [] (unknown:0) - Switch to module: "SegmentEditor"
[DEBUG][Qt] 17.11.2024 19:26:36 [] (unknown:0) - Switch to module: "SlicerRadiomics"
[WARNING][Qt] 17.11.2024 19:41:25 [] (unknown:0) - QPixmap::scaled: Pixmap is a null pixmap
[WARNING][Qt] 17.11.2024 19:41:25 [] (unknown:0) - QPixmap::scaled: Pixmap is a null pixmap
[CRITICAL][Qt] 17.11.2024 19:41:34 [] (unknown:0) - Uncaught ReferenceError: midas is not defined
[DEBUG][Qt] 17.11.2024 19:43:37 [] (unknown:0) - Switch to module: "VectorToScalarVolume"
[WARNING][Qt] 17.11.2024 19:43:38 [] (unknown:0) - A cookie associated with a cross-site
resource at http://www.nitrc.org/ was set without the SameSite
attribute. A future release of Chrome will only deliver cookies with cross-site requests if they are set with SameSite=None
and Secure
.
You can review cookies in developer tools under Application>Storage>Cookies and see more details at https://www.chromestatus.com/feature/5088147346030592 and https://www.chromestatus.com/feature/5633521622188032.
[DEBUG][Qt] 17.11.2024 19:47:05 (unknown:0) - Switch to module: “SlicerRadiomics”
[DEBUG][Qt] 17.11.2024 19:47:06 (unknown:0) - Switch to module: “SegmentEditor”
[DEBUG][Qt] 17.11.2024 19:49:10 (unknown:0) - Switch to module: “SlicerRadiomics”
[DEBUG][Qt] 17.11.2024 20:48:47 (unknown:0) - Switch to module: “SegmentEditor”
[DEBUG][Qt] 17.11.2024 20:49:16 (unknown:0) - Switch to module: “”
从日志中可以看到,3D Slicer 的运行过程中出现了一些提示和问题,以下是关键点的总结和建议:
-
DICOM 加载问题:
- 日志中提到“Geometric issues were found with 1 of the series”,可能与 DICOM 数据的几何配置有关。
- 建议检查加载的 DICOM 数据是否完整,或者是否在其他软件中也能正确打开。
- 如果问题持续,可以尝试使用
DICOM Patcher
修复数据。
- 日志中提到“Geometric issues were found with 1 of the series”,可能与 DICOM 数据的几何配置有关。
-
扩展模块加载和切换:
- 日志显示多个模块之间频繁切换(例如
SegmentEditor
和SlicerRadiomics
),这可能是工作流程的一部分。 - 如果切换时遇到性能问题,建议关闭不必要的模块,减少内存占用。
- 日志显示多个模块之间频繁切换(例如
-
Python 和扩展依赖警告:
- 日志中提示
pip
版本过旧,建议更新:python-real.exe -m pip install --upgrade pip
。 - 确保所有必要的 Python 库和扩展模块安装完整。
- 日志中提示
-
显示相关警告:
- 日志中有提示“QPixmap::scaled: Pixmap is a null pixmap”,这表明某些 UI 图像资源加载失败。
- 检查安装是否完整,或者尝试重新安装 Slicer。
- 日志中有提示“QPixmap::scaled: Pixmap is a null pixmap”,这表明某些 UI 图像资源加载失败。
-
JavaScript 报错:
- 日志中有“Uncaught ReferenceError: midas is not defined”,可能是与扩展模块(例如
SlicerRadiomics
)的界面脚本有关。- 如果这是自定义扩展的错误,可以检查模块的安装和配置。
- 如果使用的是官方模块,请检查是否需要更新扩展。
- 日志中有“Uncaught ReferenceError: midas is not defined”,可能是与扩展模块(例如
-
其他潜在问题:
- Irregular volume geometry detected:虽未超出容差,但可能影响精度。
- 如果精度要求较高,可以重新检查和预处理输入的 DICOM 数据。
- Irregular volume geometry detected:虽未超出容差,但可能影响精度。
-
建议操作:
- 确认 DICOM 数据的完整性和一致性。
- 更新 Slicer 的扩展模块和依赖项。
- 清理可能存在的缓存数据(如
.cache
文件夹)以防止数据冲突。 - 如果问题持续,考虑切换到 Slicer 的最新稳定版本或提交错误报告。
如需更深入的帮助,可以提供更多具体的操作背景和错误发生时的工作场景。
日志
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - Session start time …: 2024-11-19 23:34:06
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - Slicer version …: 4.11.20210226 (revision 29738 / 7a593c8) win-amd64 - installed release
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - Operating system …: Windows / Personal / (Build 19045, Code Page 65001) - 64-bit
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - Memory …: 8035 MB physical, 12387 MB virtual
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - CPU …: GenuineIntel , 12 cores, 12 logical processors
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - VTK configuration …: OpenGL2 rendering, TBB threading
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - Qt configuration …: version 5.15.1, with SSL, requested OpenGL 3.2 (compatibility profile)
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - Developer mode enabled …: no
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - Prefer executable CLI …: yes
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - Application path …: C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin
[DEBUG][Qt] 19.11.2024 23:34:06 (unknown:0) - Additional module paths …: NA-MIC/Extensions-29738/SlicerRadiomics/lib/Slicer-4.11/cli-modules, NA-MIC/Extensions-29738/SlicerRadiomics/lib/Slicer-4.11/qt-scripted-modules, NA-MIC/Extensions-29738/SlicerRT/lib/Slicer-4.11/cli-modules, NA-MIC/Extensions-29738/SlicerRT/lib/Slicer-4.11/qt-loadable-modules, NA-MIC/Extensions-29738/SlicerRT/lib/Slicer-4.11/qt-scripted-modules, NA-MIC/Extensions-29738/DCMQI/lib/Slicer-4.11/cli-modules, NA-MIC/Extensions-29738/CurveMaker/lib/Slicer-4.11/qt-scripted-modules, NA-MIC/Extensions-29738/QuantitativeReporting/lib/Slicer-4.11/qt-scripted-modules, NA-MIC/Extensions-29738/SlicerDevelopmentToolbox/lib/Slicer-4.11/qt-scripted-modules, NA-MIC/Extensions-29738/PETDICOMExtension/lib/Slicer-4.11/cli-modules, NA-MIC/Extensions-29738/PETDICOMExtension/lib/Slicer-4.11/qt-scripted-modules
[DEBUG][Python] 19.11.2024 23:34:09 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\lib\Python\Lib\site-packages\pydicom\datadict.py:432) - Reversing DICOM dictionary so can look up tag from a keyword…
[DEBUG][Python] 19.11.2024 23:34:12 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\lib\Slicer-4.11\qt-scripted-modules\SubjectHierarchyPlugins\AbstractScriptedSubjectHierarchyPlugin.py:36) - Scripted subject hierarchy plugin registered: Annotations
[DEBUG][Python] 19.11.2024 23:34:14 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\lib\Slicer-4.11\qt-scripted-modules\SubjectHierarchyPlugins\AbstractScriptedSubjectHierarchyPlugin.py:36) - Scripted subject hierarchy plugin registered: SegmentEditor
[DEBUG][Python] 19.11.2024 23:34:14 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\lib\Slicer-4.11\qt-scripted-modules\SubjectHierarchyPlugins\AbstractScriptedSubjectHierarchyPlugin.py:36) - Scripted subject hierarchy plugin registered: SegmentStatistics
[DEBUG][Qt] 19.11.2024 23:34:14 (unknown:0) - Switch to module: “Welcome”
[DEBUG][Qt] 19.11.2024 23:34:19 (unknown:0) - Switch to module: “DICOM”
[DEBUG][Python] 19.11.2024 23:34:36 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:52) - DICOMParametricMapPluginClass : Caching files
[DEBUG][Python] 19.11.2024 23:34:36 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:49) - DICOMParametricMapPluginClass : Using cached files
[WARNING][Python] 19.11.2024 23:34:36 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\lib\Slicer-4.11\qt-scripted-modules\DICOMLib\DICOMUtils.py:629) - Geometric issues were found with 1 of the series. Please use caution.
[CRITICAL][Stream] 19.11.2024 23:34:36 (unknown:0) - Geometric issues were found with 1 of the series. Please use caution.
[CRITICAL][Stream] 19.11.2024 23:34:36 (unknown:0) -
[DEBUG][Python] 19.11.2024 23:34:36 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:52) - DICOMSegmentationPluginClass : Caching files
[DEBUG][Python] 19.11.2024 23:34:36 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:49) - DICOMSegmentationPluginClass : Using cached files
[DEBUG][Python] 19.11.2024 23:34:36 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:52) - DICOMTID1500PluginClass : Caching files
[DEBUG][Python] 19.11.2024 23:34:36 [Python] (C:\Users\86136\AppData\Local\NA-MIC\Slicer 4.11.20210226\NA-MIC\Extensions-29738\QuantitativeReporting\lib\Slicer-4.11\qt-scripted-modules\base\DICOMPluginBase.py:49) - DICOMTID1500PluginClass : Using cached files
[INFO][Python] 19.11.2024 23:34:38 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/…/lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:384) - Loading with imageIOName: GDCM
[INFO][Python] 19.11.2024 23:34:38 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/…/lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:458) - Window/level found in DICOM tags (center=367.98, width=640.16) has been applied to volume 1701: T1W_HR_mDIXON+C
[DEBUG][Python] 19.11.2024 23:34:38 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/…/lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:799) - Irregular volume geometry detected, but maximum error is within tolerance (maximum error of 7.49401e-06 mm, tolerance threshold is 0.001 mm).
[INFO][Stream] 19.11.2024 23:34:38 (unknown:0) - Loading with imageIOName: GDCM
[INFO][Stream] 19.11.2024 23:34:38 (unknown:0) - Window/level found in DICOM tags (center=367.98, width=640.16) has been applied to volume 1701: T1W_HR_mDIXON+C
[INFO][Python] 19.11.2024 23:34:38 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/…/lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:384) - Loading with imageIOName: GDCM
[INFO][Python] 19.11.2024 23:34:39 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/…/lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:458) - Window/level found in DICOM tags (center=499.64, width=868.46) has been applied to volume 1701: T1W_HR_mDIXON+C_1
[DEBUG][Python] 19.11.2024 23:34:39 [Python] (C:/Users/86136/AppData/Local/NA-MIC/Slicer 4.11.20210226/bin/…/lib/Slicer-4.11/qt-scripted-modules/DICOMScalarVolumePlugin.py:799) - Irregular volume geometry detected, but maximum error is within tolerance (maximum error of 7.49401e-06 mm, tolerance threshold is 0.001 mm).
[INFO][Stream] 19.11.2024 23:34:38 (unknown:0) - Loading with imageIOName: GDCM
[INFO][Stream] 19.11.2024 23:34:39 (unknown:0) - Window/level found in DICOM tags (center=499.64, width=868.46) has been applied to volume 1701: T1W_HR_mDIXON+C_1
[DEBUG][Qt] 19.11.2024 23:34:42 (unknown:0) - Switch to module: “SegmentEditor”
[DEBUG][Qt] 19.11.2024 23:35:25 (unknown:0) - Switch to module: “SlicerRadiomics”
关键日志分析
- 软件和系统信息:
- Slicer版本:4.11.20210226
- 操作系统:Windows 64位
- CPU:12核
- 内存:8GB(物理),12GB(虚拟)
- 渲染配置:OpenGL2、TBB线程支持
- 扩展模块路径包含多个插件(如
SlicerRadiomics
,SlicerRT
,CurveMaker
)。
- DICOM加载与处理:
- 加载的DICOM数据:
T1W_HR_mDIXON+C
和T1W_HR_mDIXON+C_1
。 - 窗口/层级值(WL):
- 中心值
367.98
,宽度640.16
应用于第一个数据集。 - 中心值
499.64
,宽度868.46
应用于第二个数据集。
- 中心值
- 体素几何问题:
- 警告:发现几何问题,但误差在容许范围内(
最大误差 7.49401e-06 mm
,阈值0.001 mm
)。
- 警告:发现几何问题,但误差在容许范围内(
- 警告与关键问题:
- [CRITICAL]:
Geometric issues were found with 1 of the series. Please use caution.
- 说明部分DICOM系列几何结构存在潜在问题(可能是切片不对齐或间隔不均匀),需要在后续处理时特别留意。
- [WARNING]:
Geometric issues
和Irregular volume geometry detected
。- 表明加载的数据并非严格规则的体积结构,但误差较小。
从图片可见载入数据的插件选择为:MultVolumeImporterPlugin。
建议:
1.3DSlicer软件版本请选择最新稳定版本:5.6.2
2.请在DICOM模块中取消勾选时间序列插件MultiVolumeImporterPlugin,只勾选标量数据插件DICOMScalarVolumePlugin。 对于普通CT/MRI数据,保持 DICOMScalarVolumePlugin
勾选即可。
老师,取消这个插件的具体位置在哪呢,我没找到
谢谢曹老师的解答,我终于弄好了